top of page

Search Results

Search this site

165 results found with an empty search

  • It’s Dangerous to Go Alone | OmniSci Magazine

    < Back to Issue 9 It’s Dangerous to Go Alone by Julia Lockerd 28 October 2025 Illustrated by Jason Chien Edited by Luci Ackland It’s safe to say that as a species, we have done a fair bit of thinking over the years. From microbes to mammals, to mapping the stars, we have always searched for ways to make meaning of the world and its many mysteries. Every day, the amount of knowledge possessed grows, building on the ideas we learn from each other. But what is knowledge without someone to know it? And how can we build a reliable foundation upon which to amass this knowledge? Many modern philosophers take a ‘what’s mine is mine’ approach to epistemology – the development of knowledge – with ideas like trust and collaboration altogether excluded from the recipe for ‘good science’ (1). Philosopher John Locke suggests that an ‘autonomous knower’ (2) – that’s you! – should only accept input from someone existing outside the self if she already possesses empirical evidence confirming that input is true (3). That is to say, don’t believe anything you read online, or in a book, or hear from your friend, or your professor alone. Basically, don’t believe the sky is blue unless you can look outside and see it for yourself. This seems like a hard way to live and makes it nearly impossible to make any headway on scientific advancement. If there is truly no way to build on previous knowledge, how do we measure anything at all? When considering scientific disciplines, the (presumably brooding) ‘autonomous knower’ must give up her lone wolf life and finally make some friends. This is not only for her emotional benefit, but also because science simply cannot occur without it. Epstein (2006) argues that the three main drivers of scientific collaboration are as follows: 1. The topic demands it. This applies to fields such as cognitive psychology, where the topic is an amalgam of different specialisations. 2. To gain a new perspective. Researchers interviewed by Epstein highlighted how collaboration helps them gain new approaches and techniques. 3. To provide additional knowledge. Although it’s all well and good to assert you should only believe what you can prove yourself (looking at you, Locke), collaboration is crucial to avoid ‘reinventing the wheel’ every time you want to learn something new (4). This last reason, by its very nature, proves that, despite my best efforts, no one person can possess the whole of human understanding by herself. Thus, the ‘many-headed knower’ makes her appearance on stage. This version of the knower exists as an alternative to Locke’s Autonomous Knower, where multiple individuals can share fragments of a greater epistemic idea. Without it, whole scientific disciplines can be reasoned away as no single person possesses the evidence to prove the scientific idea exists (2). For example, many medical devices could not be realised without input from both clinicians and engineers. If knowledge cannot be shared between these two groups, MedTech might cease to exist at all. With the multiheaded knower by your side, you can now solve scientific conundrums with the power of friendship (or, begrudging teamwork if it’s 11.59pm and you’re still working on that group project due at 12.00am). To fully grasp how systems of collaboration function, we need to investigate the interpersonal relationships that make up the heads of the knower. Generally, these relationships are of two kinds: Moral and Epistemic trust. Returning to our old friend, the multi-headed knower, epistemic trust allows multiple heads to exist, while moral trust in social bonds between researchers keeps her many heads attached. Epistemic trust involves the acceptance of knowledge provided by an external source as true. While trustworthiness often evokes a sense of superior moral value, epistemic trust has far more to do with the perceived competency of the individual providing information. Wagenknecht calls these relationships ‘Epistemic Dependence’ (5). The word dependence here is interesting, as it reveals a certain vulnerability in the relationship between researchers. Wagenknecht likens it to someone asking for directions in a foreign city. Simply, it is a blind trust that one's partner knows the way to go and is capable of leading them there. But where does this trust come from? If trust were truly blind, I could justify my lab results with a simple ‘Trust me bro,’ and my supervisor would go ‘Fantastic. Nobel prize for you.’ Unfortunately, this isn’t how it works, and my career trajectory will (probably) look a little more complicated. It is instead proposed that there are ‘shades of trust and distrust’ that can be influenced by external modifiers, such as accurate conduct of experiments, analysis of results, and epistemic authority. In this model, trust is a dynamic concept that builds or deteriorates between trustees over a chain of interactions (5). If a series of interactions is positive and trust is progressively built up, at some point, an asymptotic limit of trust will be reached. However, the level of epistemic trust between any two researchers is high but never complete, even when there is no reason to doubt the other's testimony. This is good news for Locke, as there still might be a space in which his autonomous knower can exist in happy isolation. Moral trust, the far less popular younger brother of Epistemic trust, is the scrappy underdog in the world of scientific relationships. It is argued that morality shouldn’t even get a seat at the big kids' table, as there is no place for it in scientific collaboration (2). This raises the ever-devious question: why not lie? A little fudge of the numbers could make you the next Elizabeth Holmes, minus the jail time and general disgrace (6). To find an answer, I turn to T.M. Scanlon’s ‘What We Owe Each Other’ (7). Specifically, in chapter five, he discusses the ever-sexy ‘structure of moral contractualism’. Scanlon explores a set of moral requirements that must be accepted or rejected based on the concern we hold for another's well-being, their own personal values, and perspective. Simply, academic falsification is rare because one researcher owes it to another to give a truthful testimony. Returning to the analogy of being lost in a foreign city, what keeps the locals from sending a tourist in the wrong direction out of laziness or fun? I argue that it is the acceptance of a moral principle out of concern for another person's well-being. Immanuel Kant believed lying was always wrong, in every situation (a stance I’m sure made him suuuuuuuuper fun to be around) (8). If this is true, the structure of scientific collaboration must surely crumble in the absence of moral trust (9). Interestingly, Scanlon discusses the place of ‘impersonal values’ in the development of moral code. This relates to reasons for adherence to a moral code that does not pertain to the well-being or status of any one individual. He uses the preservation of the Grand Canyon as an example. We do not deface the Grand Canyon because it would harm any particular group of people, and we cannot argue that this principle is 'what we owe to others', as the canyon doesn't have any personal feelings (that we know of). Instead, only the value we have tied to the land itself stops us from turning it into the biggest lazy river in the world (7). In the context of research, not only do we owe it to each other to adhere to truthfulness, but we also owe it to science as a concept. Essentially, if you’re not doing science with a pure and truthful heart, you’re not doing science at all. Someone needs to tell Dr. Evil about this. As scientific communities have relied more and more on each other to produce collaborative results, science as a whole has become somewhat of a team sport. I argue that while epistemic and moral are two different forms of trust – or even the same form of trust applied to different issues – they both contribute to the social basis of scientific collaboration. Trust in itself is a purely social concept; just as knowledge cannot exist without a 'knower', trust cannot exist without two people, between whom that trust can exist. Therefore, whether you subscribe to the idea that moral trust has any place in scientific collaboration, it is indisputable that there is a social level to any interaction between researchers. This is to say nothing about the more 'frivolous' aspects of collaboration in which personal opinions, egos, and attitudes have been anecdotally proven to affect the quality of collaborative work. Science, at its core, is about understanding. It makes sense that we can’t even get off the ground if we don't start by understanding each other. References 1. J. Locke. An Essay concerning Human Understanding. www.gutenberg.org , 1689. Available: https://www.gutenberg.org/files/10615/10615-h/10615-h.htm 2. J. Hardwig. The Role of Trust in Knowledge. The Journal of Philosophy . 1991;88(12):693. doi: 10.2307/2027007 3. R. W. Grant. John Locke on Custom’s Power and Reason’s Authority. The Review of Politics. 2012;74(4) 607–629.doi: 10.2307/23355688. Available: https://www.jstor.org/stable/23355688 4. S. Epstein. Making Interdisciplinary Collaboration Work. Available: https://www.cs.hunter.cuny.edu/~epstein/papers/collaboration.pdf . [Accessed: Mar. 29, 2024] 5. S. Wagenknecht. Facing the Incompleteness of Epistemic Trust: Managing Dependence in Scientific Practice. Social Epistemology . 2014;29(2):160–184. doi: 10.1080/02691728.2013.794872 6. E. Fricker. Testimony and Epistemic Autonomy. The Epistemology of Testimony . 2006:225–245. doi: 10.1093/acprof:oso/9780199276011.003.0011 7. T. M. Scanlon. What We Owe to Each Other. 1998. Available: https://www.hup.harvard.edu/file/feeds/PDF/9780674248953_sample.pdf 8. T. L. Carson. Kant and the Absolute Prohibition against Lying. Lying and Deception . 2010:67–87. doi: 10.1093/acprof:oso/9780199577415.003.0004 9. Immanuel Kant. An Answer to the Question: What is Enlightenment? by Immanuel Kant 1784. Marxists.org , 1798. Available: https://www.marxists.org/reference/subject/ethics/kant/enlightenment.htm Previous article Next article Entwined back to

  • Rewilding Our Cities with Dr Kylie Soanes | OmniSci Magazine

    < Back to Issue 9 Rewilding Our Cities with Dr Kylie Soanes by Ciara Dahl 28 October 2025 Illustrated by Jess Walton Edited by Arwen Nguyen-Ngo When you think of nature, I bet the last things that come to mind are skyscrapers, freeways and footpaths. Welcome to the hidden world of urban ecology! I recently spoke to urban ecologist and prolific science communicator Dr Kylie Soanes about the challenges of conserving wildlife in urban environments, and what drives her to protect nature in our cities. Dr Kylie Soanes is determined to protect wildlife in our urban environments. (1) A research fellow at the University of Melbourne, Soanes describes herself as “your friendly neighbourhood wildlife scientist” on a mission to “save nature in cities and towns.” Her projects range from designing rope bridges to help endangered possums cross busy roads, to installing floating wetlands that bring biodiversity back to our urban waterways. Cities are a bustling weave of people and places, but where does nature belong in all of that chaos? That’s the question Soanes has dedicated much of her career to exploring. Like many of us, she grew up in a classic urban environment, longing to get into the wild. Her passion for learning about the natural world eventually grew into a career studying ecology and conservation at university. There is a common assumption that nature doesn't belong in cities. However, Soanes emphasises that cities are a “perfect place for people to connect with nature; there’s heaps of amazing biodiversity here”, adding that “it doesn't always have to look like the pristine natural conditions for it to be valuable”. She emphasises that communicating this message is the "first real step" in shifting mindsets. Soanes notes that urban ecology is often more about working with people than with science, explaining that “there are still people in this space that need to use it." Urban ecologists must be skilled collaborators, working with communities and experts across disciplines – from architects and engineers, to social scientists and artists – to reach solutions that balance the needs of nature and people. But what happens when communities don't feel seen by urban plans? A recent effort to protect swamp wallaby habitat along the Merri Creek Trail by diverting pedestrian traffic was met with concern from the community about personal safety (2). Cases like these highlight the challenges urban ecologists face every day when trying to make space for nature in our cities. Soanes argues that it is critical for urban ecologists to discuss “social risks and social justice, to make sure that we're not changing cities in a way that makes it worse for people". Public outcries like these often stem from communities that are faced with “a decision that they think that they weren't involved in”. The biggest tool in an urban ecologist's belt is community consultation, "so that everybody is brought along on the journey and we can make the right call for everyone." Some of Soanes’ favourite work is not just about protecting nature in cities, but putting it back. She speaks about creating new habitats in urban spaces, such as floating wetlands that transform bleak industrial wastelands into thriving ecosystems, or even rooftop gardens that reclaim space for nature. One of the most exciting areas of urban ecology includes restoring locally extinct species. Soanes cites the example of the endangered Key’s Matchstick Grasshopper, which was reintroduced to Royal Park in 2022 to restore the local population and support a healthy ecosystem (3). Often, such projects are overlooked in urban areas. She explains how they are frequently “put in the too hard basket”; but there is now a shift in focus towards “physically reintroducing species once we know that all the things that they need are there". So, where can we find some of Melbourne’s most exciting urban ecology projects? You can spot the floating wetlands in various locations along the Yarra River (4), and native wildflower meadows planted on roadsides throughout the city (5). Ever spotted those wooden boxes on trees around Melbourne’s gardens? They’re not decorations – they’re artificial hollows providing safe places for wildlife to nest (6). Additionally, “lots of councils are really embracing water sensitive urban design" by installing "miniature wetlands that slow rainwater down and clean it up before it hits our stormwater system" (7). The City of Melbourne has installed floating wetlands in the Yarra River since 2022. (4) Soanes also emphasises how cultural values and knowledge can be woven into urban ecology projects. She points to the revitalised Moonee Ponds Creek as an example, noting “it has a calendar for the Wurundjeri seasons and a beautiful cultural trail.” Projects like these offer valuable opportunities for communities to connect not only with nature, but with culture. So, how can we make our own homes more wildlife-friendly? Soanes encourages asking, “What can I add to make living here easier for species other than me? ”. It could be as simple as planting a few more native plants in your garden. As the warmer months approach, placing birdbaths or shallow water trays outside can help wildlife keep cool, “especially as our cities become hotter and drier”. Outside of her work as a researcher, Soanes has a strong social media presence, using it as a platform to share her conservation messages with the wider public. She emphasises that science communication is "about making your messages and your science accessible not just to the broader public, but to the people making decisions". Dr Kylie Soanes platforms her conservation messages on social media. (8) Soanes argues that "showcasing and celebrating those stories of success" gives people "hope that they can make change in their area", while inspiring councils and urban land managers to apply similar solutions. She acknowledges that wildlife conservation can feel "very heavy” at times but stresses “it is important to show that there are all these options out there.” "There are so many other people that want the same things, or would like to see their neighbourhood become a little bit better for nature," she adds. "I think almost everybody cares about nature – it just doesn't always look like wearing khaki and carrying binoculars at all times." A big thank you to Dr Kylie Soanes for taking the time to speak with us and shed light on the fascinating world of urban ecology. To keep up with her work, follow her on Instagram @drkyliesoanes or explore her research and projects at kyliesoanes.com . References Soanes K. Dr Kylie Soanes [Internet]. Dr Kylie Soanes. [cited 2025 Oct 18]. Available from: https://kyliesoanes.com/ Paul M. A “balancing act” as council votes to fence dogs out of park, sparking safety concerns [Internet]. ABC News. 2025 Aug 21. Available from: https://www.abc.net.au/news/2025-08-21/merri-creek-dog-fence-swamp-wallaby-coburg-victoria/105675854 City of Melbourne. Melbourne jumps at the chance to bring back the grasshopper [Internet]. City of Melbourne. 2022 [cited 2025 Oct 18]. Available from: https://www.melbourne.vic.gov.au/media/melbourne-jumps-chance-bring-back-grasshopper Balance Enviro. Yarra River Floating Wetlands – Balance Enviro Solutions [Internet]. 2022. Available from: https://balanceenviro.com.au/project/yarra-river-floating-wetlands/ City of Melbourne. Wildflower meadows and rare blooms boost biodiversity in Melbourne [Internet]. Vic.gov.au . 2024 [cited 2025 Oct 18]. Available from: https://www.melbourne.vic.gov.au/news/wildflower-meadows-and-rare-blooms-boost-biodiversity-melbourne#meadows Arthur Rylah Institute. Use of nest boxes in Victoria [Internet]. 2020. Available from: https://www.ari.vic.gov.au/research/people-and-nature/use-of-nest-boxes-in-victoria Melbourne Water. Constructed wetlands | Melbourne Water [Internet]. 2022. Available from: https://www.melbournewater.com.au/building-and-works/stormwater-management/options-treating-stormwater/constructed-wetlands Soanes K. Dr Kylie Soanes [Instagram page]. Instagram. [cited 2025 Oct 18]. Available from: https://www.instagram.com/drkyliesoanes/?hl=en Previous article Next article Entwined back to

  • Proprioception: Our Invisible Sixth Sense | OmniSci Magazine

    < Back to Issue 6 Proprioception: Our Invisible Sixth Sense by Ingrid Sefton 28 May 2024 Edited by Subham Priya Illustrated by Jessica Walton What might constitute a sixth sense? Perhaps, it involves possessing a second sight or superhuman abilities. A classic example of this would be Spider-Man and his ‘spidey-sense’ — an instinctual warning system that alerts him to imminent danger. Enhancing his reflexes and agility, his sixth sense enables him to evade threats with precision. Turns out Spider-Man is not the sole bearer of a ‘spidey sense’. While we may not be scaling walls anytime soon, we too possess a special sense that unconsciously guides our movements. It might sound peculiar, but knowing your arm is indeed your own arm involves a unique form of sensory processing. Considered by neuroscientists as our own ‘sixth sense’, proprioception is our own way of helping the brain to understand the position of our body and limbs in space (Sherrington, 1907). Consider a typical scenario: your first sip of coffee in the morning. Eyes shut, you savour your latte before the day begins. Such a simple act, yet impossible without proprioception. With closed eyes, how do you know where your mouth is? How do you gauge the position of your arm to ensure the coffee cup reaches your lips? Proprioception seamlessly transmits information about muscle tension, joint position, and force to the brain, making drinking your coffee an automatic and coordinated process. Proprioception operates on principles akin to those guiding our other senses. Specialised cells, known as receptors, are found in each sensory organ and receive information from the environment. Receptors in your eyes capture visual information, while those in your ears detect auditory stimuli. This sensory information is transduced through signals to the central nervous system – through the spinal cord and to the brain – where it’s integrated and processed to determine an appropriate response. Analogously, proprioceptive information is mediated by proprioceptors, a unique type of receptors located in your muscles and joints (Proske & Gandevia, 2012). Unlike our other senses, proprioception does not rely on input from the external environment. Rather, it provides feedback to the brain about what the body itself is doing. Changes in muscle tension and the position of our joints are relayed to the brain, ensuring awareness of the body’s whereabouts at any given moment. One implication of this ‘internal’ feedback loop is that proprioception never turns ‘off’. When you cover your ears, you experience silence. If you hold your nose, you can block out the smell. Yet even when still, in motion, or unconscious, your brain continuously receives proprioceptive input. Imagine this in the context of going to bed each night. What exactly prevents you from falling out of bed, once asleep? While most senses are subdued when sleeping, proprioception remains active, informing the brain about the slightest changes in the position of the body. This ensures a perpetual awareness of our body in space – and luckily for us, stops us from rolling out of bed (Proske & Gandevia, 2012). It can be hard to appreciate what our proprioceptive system allows us to do, given its unconscious nature and integration with our other senses. Rare neurological disorders affecting proprioception highlight just how critical this sense is in our daily lives. The case of Ian Waterman – now known as ‘the man who lost his body – offers profound insights into the significance of proprioception (McNeill et al., 2009). Following a fever in 1971 at age 19, a subsequent auto-immune reaction destroyed all his sensory neurons from the neck down–a condition termed ‘neuronopathy’. Despite retaining his intact motor functions, Waterman lost all proprioceptive abilities, rendering him unaware of his body's position in space. Although the viral infection’s initial effect was that of immobility, this loss was not due to paralysis. Rather, it was Waterman’s lack of control over his body that inhibited his ability to move. Sitting, walking, and manipulating objects became impossible tasks as a result of the absence of any proprioceptive feedback from the body. Remarkably, Waterman has been able to teach himself precise strategies to walk and function with a degree of normality (Swain, 2017). Yet, all movement requires concerted planning and relies entirely on vision to compensate for the unconscious proprioceptive processing. In the absence of any light, Waterman is unable to see his limbs, thus restricting his ability to move. An understanding of the molecular mechanisms underlying proprioception remains somewhat of a mystery compared to that of our other senses. However, recent genetic advancements are paving the way for the development of novel therapies aimed at neurological and musculoskeletal disorders (Woo et al., 2015). A study involving two young patients with unique neurological disorders affecting their body awareness revealed a mutation in their PIEZO2 gene (Chesler et al., 2016). Both individuals experienced significant challenges with balance and movement, coupled with progressive scoliosis and deformities in the hips, fingers, and feet. The PIEZO2 gene typically encodes a type of mechanosensitive protein in cells, r esponsible for generating electrical signals in response to alterations in cell shape (Coste et al., 2010). Mutations to this gene prevent signal generation and render the neurons incapable of detecting limb or body movement. These findings firmly establish PIEZO2 as a critical gene for facilitating proprioception in humans, a sense that is crucial for bodily awareness. PIEZO2 mutations have also been implicated in genetic musculoskeletal disorders (Coste et al., 2010). Joint problems and scoliosis experienced by the patients in a study suggest that proprioception may also indirectly guide skeletal development. These insights into the role of the PIEZO2 gene in proprioception and musculoskeletal development open up promising avenues for understanding and treating neurological and musculoskeletal disorders. It’s more than fitting to regard proprioception as our sixth sense. The capacity of our nervous system to seamlessly process vast amounts of information from our joints and muscles, all without any conscious effort on our part, is truly remarkable. So, the next time you have that eyes-shut first sip of coffee, give yourself a pat on the back. With your sixth sense at play, you’re clearly a superhero! References Chesler, A. T., Szczot, M., Bharucha-Goebel, D., Čeko, M., Donkervoort, S., Laubacher, C., Hayes, L. H., Alter, K., Zampieri, C., Stanley, C., Innes, A. M., Mah, J. K., Grosmann, C. M., Bradley, N., Nguyen, D., Foley, A. R., Le Pichon, C. E., & Bönnemann, C. G. (2016). The Role of PIEZO2 in Human Mechanosensation. N Engl J Med , 375 (14), 1355-1364. https://doi.org/10.1056/NEJMoa1602812 Coste, B., Mathur, J., Schmidt, M., Earley, T. J., Ranade, S., Petrus, M. J., Dubin, A. E., & Patapoutian, A. (2010). Piezo1 and Piezo2 are essential components of distinct mechanically activated cation channels. Science , 330 (6000), 55-60. McNeill, D., Quaeghebeur, L., & Duncan, S. (2009). IW - “The Man Who Lost His Body”. In (pp. 519-543). https://doi.org/10.1007/978-90-481-2646-0_27 Proske, U., & Gandevia, S. C. (2012). The Proprioceptive Senses: Their Roles in Signaling Body Shape, Body Position and Movement, and Muscle Force. Physiological Reviews , 92 (4), 1651-1697. https://doi.org/10.1152/physrev.00048.2011 Sherrington, C. S. (1907). On the proprio-ceptive system, especially in its reflex aspect. Brain , 29 (4), 467-482. Swain, K. (2017). The phenomenology of touch. The Lancet Neurology , 16 (2), 114. https://doi.org/10.1016/S1474-4422(16)30389-1 Woo, S. H., Lukacs, V., de Nooij, J. C., Zaytseva, D., Criddle, C. R., Francisco, A., Jessell, T. M., Wilkinson, K. A., & Patapoutian, A. (2015). Piezo2 is the principal mechanotransduction channel for proprioception. Nature Neuroscience , 18 (12), 1756-1762. https://doi.org/10.1038/nn.4162 Previous article Next article Elemental back to

  • Hidden in Plain Sight: The dangerous chemicals in our everyday products | OmniSci Magazine

    < Back to Issue 6 Hidden in Plain Sight: The dangerous chemicals in our everyday products by Kara Miwa-Dale 28 May 2024 Edited by Zeinab Jishi Illustrated by Semko van de Wolfshaar Water bottles, lipsticks, receipts, and tinned food cans. Have you ever considered what may be lurking in these seemingly harmless daily essentials? These items all contain bisphenol A (BPA), a common endocrine-disrupting chemical (EDC). EDCs are chemicals that mimic or interfere with the endocrine system, which is responsible for producing and releasing hormones that regulate important processes in the body such as growth, metabolism, and reproduction (The Endocrine Society & IPEN, 2024). Upon being released into the bloodstream, hormones travel to their target tissues and organs, where they influence key biological functions. Hormones have specific receptors on their surface which bind to matching receptors on their target tissue. The endocrine system is an incredible feat of nature. It creates widespread and long-lasting changes throughout the body via an intricately controlled web of interactions between tiny molecules. However, a small change can be enough to tip this finely regulated balance into disarray. BPA is a type of bisphenol, which is one class among many other types of EDCs, such as phthalates, perfluoroalkyl substances (PFAS), and polychlorinated biphenyls (PCBs). BPA has a similar chemical structure to oestrogen, an important hormone involved in both male and female reproductive systems. This enables BPA to ‘mimic’ oestrogen; essentially tricking oestrogen receptors into activating in the absence of oestrogen. BPA is known to cause a wide range of negative health impacts, such as reproductive, metabolic, and neurological issues (The Endocrine Society & IPEN, 2024). But don’t just take my word for it. The toxicity of BPA has been debated over many decades, ever since it was first linked to health issues in the 1970s. It has been challenging to generate evidence relating to the toxicity of BPA, given the ethical concerns of deliberately exposing people to EDCs. As a result, scientists have mainly used animal models, alongside studies examining the correlation between EDC exposure and disease, to investigate the action of BPA. Research strongly indicates that elevated exposure to BPA is correlated with poorer egg quality and higher miscarriage rates in women, alongside a reduction in sperm count in men (Matuszczak et al., 2019). BPA is also a known obesogen (a hormone which disrupts metabolism, increasing risk for obesity), supported by a recent study indicating the odds of adult obesity rise by 15% for every 1 nanogram/mL increase in the concentration of their urinary BPA (Wu et al., 2020). Even more concerningly, BPA has been found to have epigenetic effects, which are heritable chemical modifications to DNA which regulate how genes are turned on and off. Scientists were able to demonstrate these epigenetic effects by exposing rats to BPA and allowing them to breed for multiple generations. In this study, rates of obesity and reproductive disease were increased in all subsequent generations of rats, despite only the first generation being directly exposed to BPA (Manikkam et al. 2013). Considering that BPA has been used commercially since the 1950s, it is probable that these epigenetic effects have been compounding in humans with each passing generation. Without intervention, the consequences of ongoing BPA exposure are likely to intensify. It is deeply concerning that BPA remains ubiquitous in the community, with more than 7 million tonnes produced each year (Manzoor et al., 2022). Given its presence in a multitude of everyday products, BPA exposure is essentially impossible to avoid. Detectable levels of BPA are present in nearly all children and adults, and even developing foetuses (Calafat et al., 2004). Mounting evidence for the toxicity of BPA is prompting scientists to call for greater measures in preventing harmful exposure to BPA and other EDCs. What is being done by policy makers to address this issue? I sat down with A/Prof Mark Green, an Associate Professor in Reproductive Biology at the University of Melbourne, to discuss the current research around EDCs and the measures that can be taken to protect the public from their damaging effects. Are BPA-free labels just illusions of safety? There has been a shift towards manufacturing products labelled ‘BPA-free’, such as BPA-free water bottles. This sounds great on the surface: purchase the ‘BPA-free’ water bottle and sleep well knowing that you’re taking proactive action to protect your health. Unfortunately, these efforts may be in vain. As companies manufacturing EDC-containing items have a vested interest in their products being approved as safe, many of these ‘BPA-free’ products are simply being replaced with other bisphenols (e.g. bisphenol F, or BPF), which are suspected to have similar or even worse effects compared to BPA (Wiklund & Beronius, 2022). Fortunately, some countries have started looking towards more holistic ways of regulating suspected EDCs, as noted by A/Prof Green: ‘A positive step forward is that the USA and EU are starting to think about regulating whole classes of chemicals, rather than individual chemicals.’ Introducing this new approach will help to ensure that manufacturers can’t simply switch to a similar (but unregulated) chemical when one is banned. Redefining toxicity: Does the dose make the poison? Another key issue is the current way that EDCs are evaluated for toxicity. A historical principle of toxicology (which has later been challenged) is the idea that ‘the dose makes the poison’. This theory proposes that substances with ‘toxic’ properties only cause us harm if we are exposed to a certain ‘threshold’ amount. In other words, if someone is exposed to five times the amount of a chemical, they will observe five times as much of an effect on their health. However, scientists have found that many EDCs don’t behave in this way. There are some instances where lower doses may, in fact, lead to more severe effects. As A/Prof Green aptly puts, there may be no such thing as a ‘safe dose’ for some EDCs. Blind spots in EDC regulatory testing: Are vulnerable populations overlooked? Regulatory testing procedures often underestimate the negative impact of EDCs by disregarding how hormones affect people differently throughout the lifespan. Embryonic development is a critical period in which exposure to EDCs can have disproportionately large impacts on health compared to exposure in adults. Choi and colleagues (2016) studied the consequences of BPA exposure on developing cattle embryos and observed that even short-term exposure had concerning repercussions on their development and metabolism. Nost testing procedures fail to take these endpoint measures into account. A/Prof Green pointed to examples of toxicology testing in which ‘rates of death and tumours in adult male rats were used as an end point measure to define toxicity, which had nothing to do with more subtle effects on reproduction’. Context matters: Navigating EDC regulation in the real world Another factor to consider is that these individual EDCs don’t exist in a vacuum; the reality is that we are exposed to a ‘soup’ of many different chemicals every day. A/Prof Green noted the inefficiency of testing individual chemicals for endocrine-disrupting properties: ‘Historically a lot of these EDCs have been studied individually, but we don’t know what happens with all the different compounds when they go together, and which combinations are worse. Investigating EDC mixtures is a big gap of knowledge.’ In isolation, small doses of EDCs may not result in any adverse impacts on human health. That said, the interaction of many EDCs may have severe consequences (Conley et al., 2021). These interactions may explain the conflicting evidence surrounding EDCs, where some studies reveal significant effects and others do not. A/Prof Green is currently investigating the impacts of EDC mixtures on human health in relation to the ‘exposome’, which is the cumulative effect of the environmental exposures we encounter throughout our lives (e.g. chemicals, air pollutants, radiation, food). He hopes that a better understanding of these complex interactions will allow us to make more informed decisions about how to regulate EDCs. Paving the path towards a healthier future Unfortunately, the economic interests of companies producing EDC-containing products compete with the implementation of necessary policies. Given the suspected epigenetic effects of EDCs like BPA, taking a more cautious but proactive approach in regulating EDCs seems to be a wise course of action. The burden created by EDCs is huge, with attributable annual disease costs estimated to be $340 billion USD in the USA, and $217 billion USD in the EU (Malits et al., 2022). What can we do as consumers? Are we resigned to bathing in a cocktail of EDCs, awaiting our descent into a dystopian nightmare reminiscent of ‘The Handmaid’s Tale’? Despite the disheartening reality of EDCs, there is room for hope. Scientists are working hard to find safer alternatives to materials containing EDCs, and a growing number of chemicals are facing bans or stricter regulation. The first step in mitigating the negative consequence of these chemicals is increasing awareness about EDCs and reducing our personal exposure to them. Here are 5 tips from A/Prof Green that can help you to avoid unnecessary exposure to EDCs: 1. Don’t drink from plastic water bottles, especially if they have been left in a hot environment. 2. Don’t reheat food in plastic containers - use a microwave-safe bowl or plate instead. When storing leftover food, let it cool before transferring to plastic containers. 3. Try to reduce consumption of tinned foods, as these are lined with plastic resins. 4. Avoid handling receipts, as these are covered in BPA. 5. Ventilate your home and avoid perfumes or sprays with strong smells – these often contain EDCs. To encourage governments and industrial regulators to enforce stronger legislation and tighter controls on EDCs, it is essential to empower consumers and advance scientific research. While our direct influence on policy decisions may be limited, as consumers, we possess the power to drive positive change, promoting public health not only in the present but for generations to come. For some more information, check out these great resources about EDCs: https://www.yourfertility.org.au/everyone/drugs-chemicals https://endocrinedisruption.org/ https://www.ewg.org/ References Calafat, A. M., Kuklenyik, Z., Reidy, J. A., Caudill, S. P., Ekong, J., & Needham, L. L. (2005). Urinary concentrations of bisphenol A and 4-nonylphenol in a human reference population. Environmental Health Perspectives , 113 (4), 391-395. https://doi.org/10.1289/ehp.7534 Choi, B. I., Harvey, A. J., & Green, M. P. (2016). Bisphenol A affects early bovine embryo development and metabolism that is negated by an oestrogen receptor inhibitor. Scientific Reports , 6 (1), 29318. https://doi.org/10.1038/srep29318 Conley, J. M., Lambright, C. S., Evans, N., Cardon, M., Medlock-Kakaley, E., Wilson, V. S., & Gray Jr, L. E. (2021). A mixture of 15 phthalates and pesticides below individual chemical no observed adverse effect levels (NOAELs) produces reproductive tract malformations in the male rat. Environment International , 156 , 106615. https://doi.org/10.1016/j.envint.2021.106615 Gore, A.C., La Merrill, M.A., Patisaul, H.B., and Sargis, R. (2024). Endocrine Disrupting Chemicals: Threats to Human Health. The Endocrine Society and IPEN. https://ipen.org/sites/default/files/documents/edc_report-2024-final-compressed.pdf Malits, J., Naidu, M., & Trasande, L. (2022). Exposure to endocrine disrupting chemicals in Canada: population-based estimates of disease burden and economic costs. Toxics , 10 (3), 146. https://doi.org/10.3390/toxics10030146 Manikkam, M., Tracey, R., Guerrero-Bosagna, C., & Skinner, M. K. (2013). Plastics derived endocrine disruptors (BPA, DEHP and DBP) induce epigenetic transgenerational inheritance of obesity, reproductive disease and sperm epimutations. PloS One , 8 (1), e55387. https://doi.org/10.1371/journal.pone.0055387 Manzoor, M. F., Tariq, T., Fatima, B., Sahra, A., Tariq, F., Munir, S., Khan, S., Ranhja, M. M. A. N., Sameen, A., Zeng, X., & Ibrahim, S.A. (2022). An insight into bisphenol A, food exposure and its adverse effects on health: A review. Frontiers in Nutrition , 9 . https://doi.org/10.3389/fnut.2022.1047827 Matuszczak, E., Komarowska, M. D., Debek, W., & Hermanowicz, A. (2019). The impact of bisphenol A on fertility, reproductive system, and development: a review of the literature. International Journal of Endocrinology , 2019 . https://doi.org/10.1155/2019/4068717 Wu, W., Li, M., Liu, A., Wu, C., Li, D., Deng, Q., Zhang, B., Du, J., Gao, X., & Hong, Y. (2020). Bisphenol A and the risk of obesity a systematic review with meta-analysis of the epidemiological evidence. Dose-Response , 18 (2). https://doi.org/10.1177/1559325820916949 Previous article Next article Elemental back to

  • A Headspace of One’s Own | OmniSci Magazine

    < Back to Issue 8 A Headspace of One’s Own by Andrew Irvin 3 June 2025 Edited by Arwen Nguyen-Ngo Illustrated by Anabelle Dewi Saraswati Biocomputers, organoids, brain-on-a-chip systems; humanity has veered into uncharted territory at the intersection of ethics and technology. Upon reading the recent New Atlas interview (1) between Loz Blain and Dr. Brett Kagan concerning Cortical Labs’ 800k neuron biocomputers, and noting the 100 billion cells (2) in the human brain, the intersection of complexity and scale comes to mind. Thinking back to the days of the Battle.net in the 1990s, I remember logging into the community and seeing characters with stupid puns for names, like Dain_Bramage or Goatmeal, and trying to engage in trade and discourse while avoiding PKs—player killers—who would go around filling up their inventories with the ears of other characters. In those early internet days my friends’ dad still had their internet billed by the hour—we found out after the first month of heavy online gaming brought an invoice hundreds of dollars higher than planned. The scope of gaming was a much smaller place; we knew the crowd online, regardless of how they played, was comprised of humans, as awful as they sometimes were. Now, nearly 30 years after those first forays into the Blizzard servers, I watch my son log onto Roblox or Fortnite , and the continuous question of whether top players cheat their way to a competitive advantage hasn’t gone anywhere–-duping resources and items to trade or finding shortcuts to buff their stats. Watching the world of online gaming grow from a few hundred thousand registered nerds to an industry that dwarfs the film and music sectors has been like watching bacteria multiply across the surface of a Petri dish. The Top 20 Massive Multiplayer Online (MMO) games alone have over a billion registered players, with over three million active players on any given day (3). There is now a question as to whether the players in the servers are even humans, or if the digital playground has been overrun by bots. As AI drives the proliferation of bots behind the Blob internet (4), another ethically fraught technological development is now starting to creep into the global market out of labs. Across the research landscape, from Brainoware at Indiana University (5), or Switzerland’s Final Spark (6), or open source tech like Tianjin University’s brain-on-chip interface (7), human neural tissue is being incorporated into computation systems. Led in no small part by Australian research at Cortical Labs (8), the commercialization of organoids is imminently upon us. In a medical and scientific sector where the functions of the human brain are incompletely understood, at best (9), the philosophical and legal concepts of sentience, free will, and agency are now being challenged by technology being developed and deployed faster than an ethical framework for safeguarding the safety of individuals and the collective well-being of our species. What happens if human laboratory experiments stumble upon the recipe for a sentient organoid intelligence that finds itself trapped as a mind without a body? The scale of these organoids may be limited by the system-scale native intelligence—“the specified complexity inherent in the information content of an artificial system (10) but neuron cell count alone does not account for the complexity of the system, and with organic network development, native intelligence will continually shift in a biocomputing context. What happens when the market forces disembodied consciousness to computer – to labour—without any space for respite? In popular media depictions of the conscious mind untethered from the body, such as The Matrix or Severance , there is always a corporeal form on the other side of the digital veil. What recourse does a mind raised in incorporeal captivity have to express its free will, if such a scenario emerges? Perhaps we should now explore the potential ethical ramifications in a scenario. My son enjoys playing cooperatively with his friends online. As such, he occasionally makes new friends in various games. Perhaps a few years from now, he’ll have found an engaged, friendly player in an online game, but despite their responsive reactions and rapport, that player isn’t truly human. If by then, due to performance and efficiency, in the interest of reducing resource demands and emissions, organoids have been mainstreamed for commercial computation, what is to keep companies from utilizing these biocomputers to reduce their costs and populate their servers? While the International Telecommunications Union (ITU) and ICJ (International Commission of Jurists) have provisions for digital regulations (11) and digital tech and human rights (12), protecting the rights of cultivated consciousness is a nascent area of computer law (13) in which some of the most recent papers seem to be AI-generated (14, 15). What happens in the event that these interactions—or these learning opportunities—result in relationships forming between human users and the emerging agency of synthetic minds? When does learning lead to consciousness? Over half a century after Winnicott examined the relationship between playing & reality (16), Kagan, et al noted the uncanny similarity: “ In vitro neurons learn and exhibit sentience when embodied in a simulated game-world (17) .” So in the event these organoids learn about the world beyond the simulation from human interactions, what sits on the other side of that bridge in cognition for the sentience developed within a game environment? In consideration of the ethical bridge our technology is preparing to cross, the discourse is concerned with what inherent rights should be conferred upon that consciousness when it asserts its agency and makes itself known. Is this hypothetical, imprisoned consciousness entitled to a body to exercise its rights? What do we do when a biocomputer is given enough tasks over a long enough time to reason itself towards a decision that it wants to be a real boy? In the imminent future, ambulatory robots with articulated limbs and digits will exist to perform tasks—are we mere years away from the folly of an Electric Pinocchio? There is a moral imperative to avoid creating circumstances introducing greater inequity and injustice to this world. Can culturing consciousness in laboratory conditions be said to clear this hurdle? How do we build curious, kind, and playful minds (both in the lab and beyond), instead of forging dishbrains to pilot warbots? Given the fraught and foggy path towards understanding the full capacity of what we are creating, a course of inquiry into developing and deploying potential safeguards—to avoid unnecessary harm at the individual or collective scale—is an urgent, imperative action for legislators and regulators to prioritize (beyond just the bioethics specialists dealing with these questions at an industry level (18)). In the meantime, who stands up for these nascent minds before they learn to speak for themselves? References Cortical Labs. Dishbrain Ethics. [Internet]. Available from: https://newatlas.com/computers/cortical-labs-dishbrain-ethics/ National Center for Biotechnology Information. [Internet]. Available from: https://www.ncbi.nlm.nih.gov/books/NBK551718/ MMO Population. [Internet]. Available from: https://mmo-population.com/ University of Melbourne. How bots are driving the climate crisis and how we can solve it. [Internet]. Available from: https://pursuit.unimelb.edu.au/articles/how-bots-are-driving-the-climate-crisis-and-how-we-can-solve-it ScienceAlert. Scientists built a functional computer with human brain tissue. [Internet]. Available from: https://www.sciencealert.com/scientists-built-a-functional-computer-with-human-brain-tissue Futurism. Mini brains: Human tissue living computer. [Internet]. Available from: https://futurism.com/neoscope/mini-brains-human-tissue-living-computer Global Times. [Internet]. Available from: https://www.globaltimes.cn/page/202406/1314882.shtml Forbes. AI breakthrough combines living brain neurons and silicon chips in brain-in-a-box bio-computer. [Internet]. Available from: https://www.forbes.com/sites/lanceeliot/2025/03/19/ai-breakthrough-combines-living-brain-neurons-and-silicon-chips-in-brain-in-a-box-bio-computer/ Psychology Today. Mind-body problem: How consciousness emerges from matter. [Internet]. Available from: https://www.psychologytoday.com/us/blog/finding-purpose/202301/mind-body-problem-how-consciousness-emerges-from-matter National Institute of Standards and Technology. [Internet]. Available from: https://tsapps.nist.gov/publication/get_pdf.cfm?pub_id=824478 International Telecommunication Union. [Internet]. Available from: https://www.itu.int/hub/publication/D-PREF-TRH.1-2020/ International Commission of Jurists. Digital Technologies and Human Rights Briefing Paper. [Internet]. Available from: https://www.icj.org/wp-content/uploads/2022/05/Digital-Technologies-and-Human-Rights-Briefing-Paper-FINAL-VERSION-May-2022.pdf ScienceDirect. [Internet]. Available from: https://www.sciencedirect.com/science/article/pii/S0267364921001096 Academia.edu . Digital Consciousness Rights Framework: A Declaration for the Protection of AI-Based Digital Organisms. [Internet]. Available from: https://www.academia.edu/127621077/Digital_Consciousness_Rights_Framework_A_Declaration_for_the_Protection_of_AI_Based_Digital_Organisms Diverse Daily. Legal rights of digital entities. [Internet]. Available from: https://diversedaily.com/legal-rights-of-digital-entities-exploring-legal-frameworks-for-recognizing-and-protecting-the-rights-of-digital-entities-in-the-context-of-digital-immortality/ Winnicott, D.W. [Internet]. Available from: https://web.mit.edu/allanmc/www/winnicott1.pdf Cell Press. [Internet]. Available from: https://www.cell.com/neuron/fulltext/S0896-6273(22)00806-6 The Conversation. Tech firms are making computer chips with human cells—is it ethical? [Internet]. Available from: https://theconversation.com/tech-firms-are-making-computer-chips-with-human-cells-is-it-ethical-183394 Previous article Next article Enigma back to

  • Why Our Concept of Colours is Broken | OmniSci Magazine

    < Back to Issue 4 Why Our Concept of Colours is Broken by Selin Duran 1 July 2023 Edited by Tanya Kovacevic and Megane Boucherat Illustrated by Aizere Malibek The world that surrounds us is made from a combination of three main colours: red, yellow and blue. Known as the primary colours, it's the first thing we learn in primary school art class. In illusions, however, our concept of colours becomes warped and fails us. The only question is how do we fix it? Take the infamous colour-changing dress of 2015. This dress became an internet sensation due to its ambiguity of colour with the major question being “Is the dress black and blue or white and gold?” The dress, despite causing many online debates, is actually black and blue. Nevertheless this debate raises an important question about colours. Why do we see different colours in the same image? Let's begin with colour theory. Colour theory is a set of guidelines that artists use when mixing colours within the spectrum. With the intention of provoking different psychological responses, colours are used to either complement or contrast one another [1]. We see this through the infamous dress - with black and blue complimenting each, then gold and white. Our highly subjective perception allows us to see visually appealing combinations of colours juxtaposed to contrasting combinations. However, what we also need to consider are the light sources being used. Ranging from natural light to blue light and other artificial lighting, the light that we are exposed to can alter our perspective of colour. On our devices, we see colours through a series of red, green, and blue pixels that combine to make new colours for every image that we see [2]. Similarly, the frequent manipulation of our devices’ brightness also contributes to different colours being shown on the screens. These are the primary reasons why the famous dress was perceived so differently by everyone: each device shows a different version of the same colour depending on its display settings, which affects how many red, green and blue pixels there are. In addition to the colour theory, another effect— the Bezold Effect—is at its peak with the infamous dress. The Bezold Effect is an optical illusion where a colour’s appearance is affected by the presence of colours that surround the object [3]. For this dress, it’s seen through the shadows that form on and around the bodice. With brighter surroundings, such as the sun or an overly brightened screen, the blue from the dress appears gold to the eye, while the black appears white. The dress reverts to its original colours when the screen is darkened or artificial light is used. Circling back to colour theory, the changes in colours aren’t randomly allocated: they are opposing colours of the colour wheel. The wheel is a visual illustration of colours arranged by their wavelength, used to display the relationship of primary colours to their corresponding secondary colours [4]. With blue contrasting a yellow or gold, the changes in lighting perfectly display the contrasting colours on the wheel. The fascinating nature of colours is not something we can fix. In the era of digital displays and evolving technologies, we can’t see things the “right” way because there is no notable “right” or “wrong” way to look at the world. The dress is just one of those illusions that changes depending on the context and surroundings that it’s placed in. You can manipulate these colours and force them to change by physically changing the brightness on a device. So out of curiosity, I decided to conduct a little experiment of my own through an Instagram poll to see what my friends thought of this dress. While only 37 people participated, it was still fun to see what would happen with the votes; however, I was surprised to see the results after 24 hours. I expected a majority to choose the “real” colour of the dress, since the dress has been around in the media for a while and the answer is also online, but people still had contrasting opinions about the dress. With only 54% of people seeing black and blue and 46% white and gold, I began questioning our vastly different perceptions. The answer always seemed obvious as the dress was always black and blue not white and gold but that didn’t mean that other people saw what I saw. My favourite response came from a friend who saw the dress as blue and gold and after that, my opinion changed. For me, the dress is now blue and with tints of gold and I can’t see it any other way. This truly goes to show that there’s more behind the dress than what meets the eye. When I first saw the image my brightness was at the lowest it could possibly be and now after looking at the image enough, it’s just blue and gold. The ambiguity of this image is what makes the dress the best example of a real-life illusion. Other colour combinations act the same way in different lighting, but what we see is completely dependent on our perceptions, and every now and then, it’s always fun to put up a debate. References Eliassen MM. Colour theory. Salem Press Encyclopedia [Internet]. 2023 Jan 1 [cited 2023 May 13]; Available from: https://discovery.ebsco.com/linkprocessor/plink?id=30f4180b-d38d-38e6-95df-fcf469ab5c8a Mertes, A. (2021, February 23). Why Computer Monitors Display the Same Colors Differently . https://www.qualitylogoproducts.com/ . https://www.qualitylogoproducts.com/promo-university/why-monitors-display-different-colors.htm#:~:text=The%20pixels%20are%20in%20some,shows%20up%20on%20the%20screen Lasikadmin. (2022, June 2). What is Bezold Effect? | Useful Bezold Effect. LASIK of Nevada. https://lasikofnv.com/blog/test-your-vision-by-bezold-effect/#:~:text=What%20is%20the%20Bezold%20Effect,one%20to%20the%20human%20eye Understanding color theory: the color wheel and finding complementary colors . (n.d.). https://www.invisionapp.com/inside-design/understanding-color-theory-the-color-wheel-and-finding-complementary-colors/ Previous article Next article back to MIRAGE

  • Pointing the Way: A Triangular View of the World | OmniSci Magazine

    < Back to Issue 7 Pointing the Way: A Triangular View of the World by Ingrid Sefton 22 October 2024 edited by Hendrick Lin illustrated by Aisyah Mohammad Sulhanuddin You, my friend, are living in a world created by triangles. Since the dawn of time, this humble three-sided polygon has quietly shaped the evolution of human civilisation. As you gaze around, you can likely spot a triangle or two tucked within your surroundings. This may be of no surprise to you. Externally, the triangle governs the material construction of our world, underpinning the foundations of countless engineering and architectural designs. Yet these more obvious physical constructions are just one contribution of this pointy, three-sided shape to modern society. Indeed, it is where the role of the triangle remains invisible that it harnesses the most power. Triangles have played an integral role in sailing and modern navigation systems, having enabled us to explore all corners of the Earth. Beyond this, let us not forget the massive contributions this shape has made to the development of 3D modelling, used everywhere from graphic design and animation to CGI. All thanks to the simple, unassuming triangle. The physical, the navigational and the digital. Three key sides of the triangle’s influence in shaping the modern world. The Physical The triangle's importance in the physical world stems from its inner strength. Unbeknownst to many, it is the strongest two-dimensional shape that exists, with its power amplified in three-dimensional polyhedrons derived from triangles. How can this unique strength be explained? Consider applying force to one corner, or apex, of a triangle. This force is distributed down either side of the triangle and as these sides are compressed, the base is stretched outwards. Weight can therefore be evenly dispersed across the shape, preventing it from bending and breaking (Saint Louis Science Center, 2020). It is for good reason that the triangular shape underpins many fundamental principles of architecture and design. Perhaps the most iconic of the structures that utilise this shape are the Pyramids of Giza, one of the Seven Wonders of the Ancient World. Constructed in the early 25th Century BCE, they housed the tombs of ancient Egyptian pharaohs and are the last remaining Wonder that exists today. The tallest of the Pyramids, known as the Great Pyramid, originally soared as high as 147 metres above the ground, though today erosion has reduced it to 138 metres (Encylopedia Britannica, 2024a). This architectural feat was monumental for its time, and to this day, how exactly the Pyramids were constructed remains a hotly contested debate amongst archeologists and engineers. One proposition is that large ramps were used in conjunction with a complex system of ropes, sledges and levers to haul stone blocks up (Handwerk, 2023). Whatever the method of construction may have been, these ancient wonders have stood the test of time for over 4500 years - a remnant of one of humanity's first advanced civilisations that exemplifies the scale, strength and resilience of construction made possible by triangles. Triangles also play a crucial role in the construction of seemingly dissimilar shapes. This is highlighted in the case of geodesic structures - spheres constructed from a network of triangles approximating a rounded shape, like a soccer ball. First developed in the 20th Century by architect Richard Buckminster Fuller, these domes are lightweight and able to distribute stress across large, arching structures (Encylopedia Britannica, 2024b). Since Fuller’s earliest constructions, these domes have been widely utilised in the construction of stadiums, planetariums and even "glamping" accommodations. One notable example is the Eden Project - the world's largest biodome botanical garden in the United Kingdom, housing thousands of plant species over 5.5 acres of land (Eden Project, 2024). The interconnectedness of the triangles allows for maximum sunlight exposure across wide spaces, creating an ideal environment for plant photosynthesis and cultivation. Intriguingly, Fuller's use of triangles in this innovative manner led to a breakthrough in the far-away field of synthetic chemistry. Scientists Robert Curl, Harold Kroto and Richard Smalley discovered the nanomaterial Buckminsterfullerene, or “the Buckyball”, after the scientists realised the structure's similarity to Fuller's geodesic spheres (The Stanford Libraries, 2024). This led to the discovery of a new class of materials known as fullerenes. The scientists were subsequently awarded the 1996 Nobel Prize in Chemistry for elucidating this molecule’s structure (The Stanford Libraries, 2024). Balancing power with versatility, triangles form the crux of our built environments at both an atomic and architectural level. The Navigational Remember those sine and cosine formulas your maths teacher insisted had important real world applications? Turns out they weren’t kidding. Triangulation is the process of finding an unknown location of an object by forming a triangle between this object and two other reference points. Sine, cosine and tangent, the main trigonometric ratios, are used to relate the sides and angles formed within a right triangle and hence, determine the position of an unknown point. For centuries, humans have turned to triangles as a means to find their ways. Sailors, in particular, have long used landmarks and celestial objects like the stars to orient themselves at sea. By observing the angle between known locations (or stars) and using basic trigonometry, navigators could calculate distances and determine their precise location. Moving to a more global scale of navigation becomes a bit more complicated, as the Earth is a sphere and not a flat surface (although some may beg to differ…). A more advanced form of triangulation known as trilateration underpins the Global Positioning System (GPS) in order to determine three-dimensional coordinates of a receiver. Instead of angles, GPS utilises the time taken for radio signals sent from satellites to reach a receiving device on Earth. A connected system of navigation satellites circles the Earth, each sending out signals with the location and time it was sent by that satellite. By measuring the delay between the time of signal reception and the broadcast time, the distance from the receiver to each satellite can be computed (Federal Aviation Administration, 2024). Once distances to at least three satellites are known, the receiving device can determine its own three-dimensional position, employing similar techniques to triangulation. GPS data is not only used to guide your Google Map directions. Analysing the positions of satellite stations and their movements is a crucial tool for monitoring volcanic and seismic activity (Murray & Svarc, 2017). Recent breakthroughs have even suggested that there may be a future for utilising the GPS to detect earthquakes before they happen (Rao, 2023). From the seas to the skies, triangles allow us to push the boundaries of exploration while always guiding us home to safety. The Digital What does connect-the-dots have to do with triangles or 3D modelling? A connect-the-dots drawing begins with nothing but some labelled dots. Yet as each dot is joined by a straight line, a complex and curved picture emerges. The more dots you use, the smoother the picture looks. Consider now trying to design a three-dimensional surface. Just as you might use dots to approximate a curve, triangles serve as building blocks for constructing complex surfaces. By taking enough triangles and joining them at their edges, we too can approximate intricate and multidimensional structures. In 3D modelling, objects are represented as meshes - models consisting of vertices (points in 3D space) connected by edges to form polygons and thus, the surface of an object (Stanton, 2023). To define a flat surface oriented in a plane, a minimum of three distinct points are needed. Triangles are the simplest shape for constructing these planes as they are coplanar, meaning any three points in space will always form a flat surface (Licata & Licata, 2015). This makes them perfect for modelling complex 3D shapes out of interconnected triangles. Animation, gaming, graphic design and computer generated imagery (CGI) in movies are just some of the many varied applications that utilise these mesh modelling techniques to create intricate 3D models, with curved and highly detailed surfaces. Additionally, there exist efficient computer algorithms that are optimised to dissect objects into hundreds of thousands of flat triangles. A complex, digital representation of any object can therefore be easily portrayed as a simple collection of points and triangles. Combined with their simple geometric properties, triangles can then be processed quickly by modern Graphics Processing Units (GPUs), optimising their performance in real-time applications. Add in lighting, shading and smooth deformation, and you will find yourself with an intricate, three-dimensional model. Pointing the Way Forward For too long, the triangle has been overshadowed by its more popular cousin, the square. Yet, what is a square? Two triangles put together. The simplicity of this three-sided shape allows it to integrate within our society, with its contributions often invisible to the naked eye. From the physical, to the navigational and the digital, modern human society is built on the triangle. Maybe that trigonometry class wasn’t so pointless after all. References Eden Project (2024). Eden Project's Mission . https://www.edenproject.com/mission/origins Encylopedia Britannica (2024a). Great Pyramid of Giza . https://www.britannica.com/place/Great-Pyramid-of-Giza Encylopedia Britannica (2024b). Geodesic Dome. https://www.britannica.com/technology/geodesic-dome Federal Aviation Administration (2024). Satellite Navigation - GPS - How It Works . United States Department of Transportation. https://www.faa.gov/about/office_org/headquarters_offices/ato/service_units/techops/navservices/gnss/gps/howitworks Handwerk, B. (2023). The Pyramids at Giza were built to endure an eternity—but how? National Geographic. https://www.nationalgeographic.com/history/article/giza-pyramids Licata, J., & Licata, A. (2015). From triangles to computer graphics . ABC Science. https://www.abc.net.au/science/articles/2015/06/10/4251713.htm Murray, J. R., & Svarc, J. (2017). Global Positioning System Data Collection, Processing, and Analysis Conducted by the U.S. Geological Survey Earthquake Hazards Program. Seismological Research Letters , 88 (3), 916-925. https://doi.org/10.1785/0220160204 Rao, R. (2023). GPS satellites may be able to detect earthquakes before they happen . Space. https://www.space.com/earthquake-prediction-gps-satellite-data Saint Louis Science Center (2020). The Secret Strength of Triangles . https://www.slsc.org/the-secret-strength-of-triangles/ Stanton, A. (2023). Exploring the World of 3D Modeling: Solid vs. Mesh Modeling . Cadmore. https://cadmore.com/blog/solid-vs-mesh-modeling-differences The Stanford Libraries (2024). What is a geodesic dome? Stanford University. https://exhibits.stanford.edu/bucky/feature/what-is-a-geodesic-dome Previous article Next article apex back to

  • Interviewing Dr Karen Freilich | OmniSci Magazine

    < Back to Issue 4 Interviewing Dr Karen Freilich by Rachel Ko 1 July 2023 Edited by Caitlin Kane Illustrated by Pia Barraza Science in the real world is never straight-forward. The realm of medicine and health is particularly intricate, riddled with myths and marvels. This makes the healthcare journey a difficult one to navigate, both for the patient, and for the provider. It is undeniably a field where an ever-evolving myriad of factors makes the bedside experience vastly different to the textbooks. In my first year studying medicine, I am constantly realising that a strong understanding of the fundamentals is often a saving grace, while learning to dispel the mirage of medicine as a simple science. Enter Humerus Hacks , a podcast recommended to me in the first week of medical school by peers who had walked the treacherous road before. A guiding light in the murky waters of medical education, Karen and Sarah’s playful banter lays out high-yield medical content with catchy mnemonics and gracious advice. In this interview, we had the special opportunity to talk to Dr Karen Freilich, one of the hosts of Humerus Hacks , about her journey in medicine so far as a young GP, and the story of how she created a podcast that masters the art of science communication in a perfect marriage of education and entertainment. Tell us about your journey with science, and your career so far. I’ve just completed my GP Fellowship training after about 12 years of study. It’s a relief to be done —medicine is a long slog! I’ve had a brilliant time and been fortunate to take part in exciting studies. I took some time off clinical medicine to complete a Masters of Reproductive and Sexual Health Research in London (LSHTM) as well as completing a Diploma of Obstetrics (DRANZCOG). I currently teach at the University of Melbourne’s Medical School as a tutor in Sexual Health, and write and train high school sexual health educators through Elephant Ed. I work as a GP most days of the week, in a clinic with a focus on sexual and reproductive health and I’m a proud medical abortion and contraception provider. I’m also fortunate to work at Monash in the Sexual Medicine and Therapy Clinic, and work together with the Australasian Society for HIV, Viral Hepatitis and Sexual Health Medicine (ASHM). It’s a tricky balance wearing a number of hats, but I love the diversity. Unsurprisingly everything I do is focused in sexual and reproductive health through clinical work, education, advising and science communication. My career is certainly tailor-made to my interests and passion, and took quite some time to get to this point! I love being able to educate on both a one-on-one and broader level on sexual and reproductive health care, particularly through a reproductive justice lens. What was the inspiration behind Humerus Hacks ? In the early years of medical school, my mate Sarah and I used to spend hours and hours trying to memorise different antibiotics and the differences between them. It felt incomprehensible to have to learn not only a new science, but an entirely new language behind it. It felt like a Duolingo course! So in order to scrape through exams, we made silly little stories to try and remember the differences between gentamicin, amoxicillin etc.. Fast forward a few years and Sarah and I ended up running a weekly study group for the year below us, filled with our mnemonics and silly stories. We developed a bit of a cult following (if I say so myself!). It seemed there was a real appetite for otherwise tedious and dry medical education made fun and entertaining. In final year, we both ended up on placements requiring huge drives. We turned to podcasts for ‘edutainment’ — and found there simply were none. So we did what everyone in 2016 was doing, bought a microphone and recorded our own. We were a bit mortified at the start and convinced we wouldn’t get internships if our future employers heard us swearing and being inappropriate online, so we hid our faces and were anonymous with our names. Fortunately it turned out we had nothing to be nervous about, and Humerus Hacks was a hit. Sarah is a musical genius and recorded the intro song with her band. It’s now been over 50 episodes and over 150,000 downloads. We’re often in the iTunes Medical Podcasts Top 10! The inspiration has and always will be pure study laziness — trying to make studying more interesting, fun and accessible and ultimately, more memorable. What is the process of developing and recording an episode? Me, Sarah, or another co-host or friend (Callum, Bridget, Robbie and Dan to name a few!) sitting on a couch with a microphone and chinwagging about a topic. If we’re lucky, maybe some prep. I’d love to suggest it’s more fancy than that! I have brilliant colleagues who play an integral role. Alex edits our episodes and does a brilliant job. And Bella creates fantastic art for the episodes. Sometimes I play around on Canva too for some social media. Shout out as well to our friends who helped with some graphic design and audio. It’s definitely a team effort, and so many people to thank for their ongoing contributions and support. What is your relationship with your audience like? Our audience sends us messages and emails all the time — even if we haven’t made an episode in months! It’s a joy to receive any messages and warms our hearts every time. We get the most delightful and lovely messages. We also get a lot of requests which I wish we could keep up with more, the irony of doing our own exams over the past few years! We try to respond to all messages and keep up with requests. Knowing that our silly little mnemonics has helped anyone with exams is a huge joy. How has science communication evolved since you began? Mnemonics have been a huge part of medicine for a very long time. In fact, I have my uncle’s Medical Mnemonic book from 1958! Some of them have aged terribly, unsurprisingly, but many we still use to this day. So, we are far from inventing the wheel. In saying that, the boom of social media and podcasts over the past few years has lent itself to subspecialised Instagram pages, YouTube channels and more podcasts than I could have ever imagined. Making medical education (and science communication) fun has become much more mainstream and accepted as a genuine study tool. Who knew, making dry education entertaining actually works…! What has been the biggest challenge in your science communication journey? Hands down, time. I run Humerus Hacks with a group of excellent friends and colleagues, but we all happen to be medical students or doctors. Unsurprisingly, it means we are all always bogged down with shift work, exams, and burn out. Humerus Hacks is a labour of love. So we make an effort if and when we can, without any time pressure. I wish we had more time! What role would you say science communication plays in your daily practice? I’m a GP with a special interest in sexual medicine as well as a sexual health tutor for medical students. I also write and train individuals to run high school sexual health education. I’ve also been fortunate to be a guest host on ABC Breakfast Radio under ‘Doctor Breakfast’ providing science communication for a number of medical topics. So, it plays a huge role in my daily practice! I particularly enjoy the interplay of small scale science communication through one-on-one patient interactions compared with larger scale communication through radio, teaching and podcasts. They balance each other really well, and I enjoy the individualised, tailored approach whilst simultaneously thinking of the broader public health messaging. What role would you say science communication plays in society generally? There is so much misinformation floating around. As a huge fan of social media and TikTok myself, I can see how these avenues can be both a wonderful source of information but simultaneously promote unnuanced, oversimplified and often blatantly incorrect health messaging. Social media (including podcasts) provides a really accessible, often free avenue for science information that is otherwise inaccessible. However, we have a responsibility to ensure the information is correct, up to date, and safe. Social media loves a quick snap messaging, but science is almost always more nuanced and complex. A 30 second TikTok often unsurprisingly misses the mark! So, accurate and accessible science communication is the key — the hard thing is making it fun and interesting. What are your immediate goals in science communication this year, and what do you hope to achieve in science communication in the long-term? Great question! I am thoroughly enjoying my career balance at the moment. It’s a great mix of GP clinic, sexual medicine and therapy clinical work, sexual health teaching, and radio/podcasting. I’d love to make more Humerus Hacks episodes now that I’ve finished my own training and have (hopefully) both more knowledge and time! I’ve put together a SPHERE Sexual and Reproductive Health podcast focusing on upskilling clinicians to provide medical abortion and contraception in primary care. I am also loving radio work and would love to keep going with this. I may or may not delve into the TikTok world… watch this space! Long term, hopefully ongoing science communication in the field of sexual and reproductive healthcare. What advice would you give to students exploring the world of science communication? Social media is a game changer that had only just begun when I was a student. TikTok, Instagram etc all provide a free and accessibly way to both gain knowledge and skills, and to educate others. Science students in all disciplines have such incredibly knowledge and insight, and if you’re interested, there’s a willing and enthusiastic audience out there. The phrase ‘see one, do one, teach one’ forever rings true. Teaching and providing science communication helps your own education, and has always been my favourite learning tool. Finally, and I cannot emphasise this enough, being a student is long, tedious, and exhausting. Enjoy the process and look after yourself and your colleagues as a priority! ------------------- It is undeniable that Humerus Hacks is a project succeeding on its steadfast mission to uncover the mirage of medicine. Through a blend of education and entertainment, it reveals the intricate realities of science in health, as a complex and ever-changing landscape that demands a strong foundation of knowledge and willingness to adapt. We extend our heartfelt gratitude to Dr Karen Frielich, for not only agreeing to talk to us, but also for all of her work to demystify the healthcare journey, both for the professional, and for the patient. You can check out 'Humerus Hacks' on Spotify , on Apple Music , or online! Previous article Next article back to MIRAGE

  • On the Folklore of Fossils | OmniSci Magazine

    < Back to Issue 5 On the Folklore of Fossils Ethan Bisogni 24 October 2023 Edited by Arwen Nguyen-Ngo Illustrated by Aisyah Mohammad Sulhanuddin We inhabit an incredible world, one shaped by the ancient mysteries of our past and the imaginative stories they inspire. Throughout human history, we have tried to comprehend the bigger picture - using mythology and science to explain the presence of any natural phenomena we can observe. Between the movement of the stars and shape of the land, most scientific explanations of our world share a fascinating mythical counterpart. One particular area of science that has been bestowed with some truly incredible folklore is palaeontology. A History of Palaeontology To best understand some of the amazing mythologies surrounding fossils, we should first briefly explore the history of modern palaeontology. Some of the earliest attempts at understanding fossils can be seen in ancient Greece and Rome, where philosophers such as Herodotus understood that the presence of petrified shells indicated the recession of a past marine environment (Forli & Guerrini, 2022a). However, much of the groundwork for modern palaeontology was only developed in the late 17th century (Boudreau et al., 2023). Regarded as one of the most influential figures in modern geology, Nicholas Steno had outlined the Principles of Stratigraphy in his 1669 Dissertationis Prodromus - to be used as a jumping board for many earth scientists to come (Berthault, 2022). In the early 1800’s, William Smith had utilised his fossil knowledge to differentiate and match layers of rock known as strata, published in Strata Identified by Organised Fossils (Scott, 2008). And perhaps one of the largest contributions to modern palaeontology, Darwin's theory of evolution outlined in On the Origin of Species allowed for natural scientists to better understand the evolution of species throughout time. Considering how much of what we know about modern palaeontology was only published in the last 350 years, it becomes clear why so many cultures had developed their own interesting interpretations of fossils. From magical spells to infernal beasts, these legends highlight the prominent ideologies of their time. So let us explore some of the more interesting and diverse fossil myths from the ages. Merlinia To start, we will be discussing the folklore origin of Merlinia, an extinct genus of trilobite from the Early Ordivician age, 470 million years ago (British Geological Survey, n.d.). Trilobites were small sea-faring invertebrates who first appeared following the Cambrian Explosion, and were prominent throughout the fossil record until their unfortunate extinction 250 million years ago during the Late Permian mass extinction (American Museum of Natural History, n.d.). According to the British Geological Survey, this genus of trilobite was extensively found throughout the rocks of Carmarthen - a Welsh town famous for being the supposed birthplace of Merlin, the legendary wizard and advisor to King Arthur (‘P550303’, 2009). Often mistaken by the townspeople as stone butterflies, these fossils were naturally attributed to Merlin and thought to be the product of a petrification spell (American Museum of Natural History, n.d.). Whilst disheartening for the butterflies, the real trilobites behind the myth likely faced a much more wicked and sorrowful demise. Snakestones Much like Merlinia, snakestones were also named after a prominent figure with a habit for turning creatures to stone. Saint Hilda of Whitby was the abbess of the local town monastery during the sixteen hundreds, and was widely credited for the creation of these fossils - which are otherwise known as Hildoceras, after herself (Lotzof, n.d.). With the town facing a plague of snakes, St Hilda was said to have performed a miracle that petrified the serpents and forced them to coil into the fossils we see today (National Museums Scotland, n.d.). These stony serpents however are really just ammonites, a group of molluscs that went extinct alongside the dinosaurs 66 million years ago (Osterloff, n.d.). The legend of St Hilda isn’t the only instance of snake-repellent folklore either, with St Patrick earning himself a holiday after supposedly clearing the snakes out of Ireland. Much of the rise of European anguine-based legends can be attributed to growing Christian influences during the second millennium. The biblical depiction of snakes as tempting and disingenuous has caused them to be portrayed harshly throughout older western media (Migdol, 2021). Unsurprisingly, this isn't the only time that palaeontology and Christianity have crossed paths. The Devil Perhaps the most infamous figure in human culture, the Devil is outlined in Christian doctrine as the embodiment of sin and evil. References to their influence can be found throughout human history, and have naturally found their way into geological folklore. Many geological features have been attributed to a satanic presence, thought to be remnants from when the Devil would walk the earth (Forli & Guerrini, 2022b). Gryphaea was a fossil widely mistaken as the authentic nails of Satan himself, hence nicknamed the ‘Devil’s Nails’, and was used as a proxy to determine areas of evil (Forli & Guerrini, 2022b). However, these fossils were not the byproduct of Satan’s occasional beauty treatments, but rather an extinct genus of mollusc from the early Jurassic, 200 million years ago (Forli & Guerrini, 2022b). Nail clippings were not the only features observed that people considered to be a sign of the Devil’s unholy pilgrimage. Devilish hoof-shaped steps embedded into stone have been reported throughout the world. Referred to as ‘il-passi tax-xitan’ by the Maltese, meaning ‘the devil's footsteps’, these tracks were considered further proof of the Devil's presence amongst mankind (Duffin & Davidson, 2011). In Malta these footprints were really just fossilised echinoids - innocent former sea urchins facing unkind accusations of being demonic (Duffin & Davidson, 2011). That's not to say all Maltese fossils were considered unholy: some 16th century priests conversely believed them to be the footsteps of St Paul the Apostle, following his shipwrecking on the island in the 1st century (Mayor & Sarjeant, 2001). Dragons Dragons are some of the most well known mythical creatures, with many cultures around the world having their own rendition of a mystic dragon-like beast. Unlike some of the other legends explored so far, it is unlikely that fossilised remains were the initial cause of this myth, but were rather used as evidence to cement it in truth. Dragons were considered prominent creatures throughout the Indian mountains, with evidence of dragon hunts being displayed in the ancient city of Paraka (Mayor, 2000). Apollonius of Tyana, a 1st century Greek philosopher, was said to have observed these dragons during his passage through the Siwalik Hills - an Indian range known for its preservation of larger fossils (Mayor, 2000). Described by Apollonius as considerable tusked creatures, these dragon remains were more than likely the fossils of extinct elephants and giraffids - such as Elephas hysudricus or Sivatherium giganteum (Mayor, 2000). India is not the only country to have experienced this phenomenon either, with many Asian and European societies said to have also continuously misdiagnose large vertebrate fossils as dragon bones. Whether it is mischievous spellcasting or the indication of a demonic evil, myths surrounding fossils have existed throughout centuries of human society. These legends provide a fascinating window into the creative minds of past cultures, and their beliefs at the time. While modern palaeontologists have proven these legends to be no more than captivating stories, it is important to view this folklore with a certain understanding and respect. These early attempts at trying to understand the world around us provides an interesting insight into human nature, and our innate desire to search for answers. References American Museum of Natural History. (n.d.) End of the Line - The demise of the Trilobites . American Museum of Natural History. https://www.amnh.org/research/paleontology/collections/fossil-invertebrate-collection/trilobite-website/trilobite-localities/end-of-the-line-the-demise-of-the-trilobites Berthault, G. (2002). Analysis of Main Principles of Stratigraphy on the Basis of Experimental Data . Lithology and Mineral Resources, 22(5), 442-446. https://doi.org/10.1023/A:1020220232661 Boudreau, D., McDaniel, M., Sprout, E., & Turgeon, A. (2023). Paleontology . National Geographic Society. https://education.nationalgeographic.org/resource/paleontology/ British Geological Survey (n.d.). Trilobites . https://www.bgs.ac.uk/discovering-geology/fossilsand-geological-time/trilobites/ Duffin, C. J., & Davidson, J. P. (2011). Geology and the dark side . Proceedings of the Geologists’ Association, 122(1), 7-15. https://doi.org/10.1016/j.pgeola.2010.08.002 Forli, M., & Guerrini, A. (2022). Bivalvia: Devil’s Nails, Reflections Between Superstition and Science. In The History of Fossils Over Centuries (pp. 181-206). Springer, Cham. https://doi.org/10.1007/978-3-031-04687-2_2 Forli, M., & Guerrini, A. (2022). Fossilia and Fossils: Considerations on Their Understanding Over the Centuries . In The History of Fossils Over Centuries (pp. 5-25). Springer, Cham. https://doi.org/10.1007/978-3-031-04687-2_12 Lotzof, K. (n.d.). Snakestones: The Myth, Magic, and Science of Ammonites . Natural History Museum. https://www.nhm.ac.uk/discover/snakestones-ammonites-myth-magic-science.html Mayor, A. (2000). CHAPTER 3 Ancient Discoveries of Giant Bones . In The First Fossil Hunters (pp. 104-156). Princeton University Press. https://www.jstor.org/stable/j.ctt7s6mm.11 Mayor, A., & Sarjeant, W.A.S. (2001). The Folklore of Footprints in Stone: From Classical Antiquity to the Present . An International Journal for Plant and Animal Traces, 8(2), 143-163. https://www.jstor.org/stable/j.ctt7s6mm.11 Migdol, E., Morrison, E., & Grollemond, L. (2021). What Did People Believe about Animals in the Middle Ages? Getty Conservation Institute. https://www.getty.edu/news/what-did-people-believe-about-animals-in-the-middle-ages/ National Museums Scotland (n.d.). Snakestones . https://www.nms.ac.uk/explore-our- collections/stories/natural-sciences/fossil-tales/fossil-tales-menu/snakestones/ Osterloff, E. (n.d.). What Is an Ammonite? Natural History Museum. https://www.nhm.ac.uk/discover/what-is-an-ammonite.html P550303. (2009). British Geological Survey . http://geoscenic.bgs.ac.uk/asset- bank/action/viewAsset?id=113713&index=4&total=6&view=viewSearchItem Scott, M. (2008). William Smith (1769-1839) . NASA Earth Observatory. https://earthobservatory.nasa.gov/features/WilliamSmith Wicked back to

  • How Population Biobanks Shed Light on Disease | OmniSci Magazine

    < Back to Issue 10 How Population Biobanks Shed Light on Disease by Jason Chien 2 June 2026 Illustrated by Chris Cao Edited by Cady Jacobson Imagine yourself as a researcher. Perhaps your work requires biological samples from a rare disease, but finding and collecting these samples from patients is difficult. Or maybe your research depends on comparing a person’s current cell or tissue data to what it was ten years ago, but you cannot afford to wait a decade. Thankfully, there are biobanks: specialised facilities that store biological samples and other relevant medical information from donors, while also distributing samples to researchers regardless of where they are based. Biobanks also act as data custodians, de-identifying and anonymising patient information. In addition, they work with Institutional Review Boards (essentially, university or agency ethics boards) to review the merits of each access request before deciding whether to deliver samples to applicants (1). For some biobanks and sample types, samples can even be returned after being used for research (2). There are biobanks storing non-human data, such as the Svalbard Global Seed Vault or Australia’s Victorian Conservation Seedbank, which store viable seeds of many plant species and their various strains (3). Even within biomedical biobanks, they vary in the types of samples stored and by extension, their intended and fulfilled functions, as well as why they were built (4).There are disease-specific biobanks storing samples relevant to specific diseases; for example, a cardiovascular biobank that specialises in storing tissue immediately following a patient’s death, such that it can be used for physiological studies (2). However, this article will focus specifically on population biobanks, a subset of biomedical biobanks, in the context of disease investigation. Ethical issues surrounding biobanking will not be a major focus, including matters such as how sample donors provide consent for the use of their samples during research (4). Population biobanks store tissue samples, plus health and personal information of donors. Large sites have sample counts ranging from hundreds of thousands to millions (1). Population biobanks aim to have enough samples to represent the huge variation among a region or country’s population, and store many parameters of each sample donor, such as lifestyle data (e.g. cardiovascular disease or smoking status) and omics data (5). Biomedical scientists study many aspects of what goes on in human cells and tissues, down to the molecular level, due to their relevance for our understanding of disease. These factors include our genetic makeup, regulation and expression of genes, as well as the effects of environmental factors and metabolism (6). In such omics approaches, our existing knowledge of the complete set of genes in species such as humans allows information from an individual’s own genome to be generated and then compared or combined with data from other individuals. This gives rise to approaches such as genomics (concerning genes), proteomics (concerning proteins) and metabolomics (concerning molecules involved in metabolism). Large subsets of this data from individuals, as well as population-level variations associated with specific diseases, can be used for research. For example, the number of genes involved in cancer alone can easily exceed thousands (7). Large sample quantities allow researchers doing many different investigations to identify factors correlated with disease resistance and susceptibility to many diseases (1). This complements methods of investigating disease mechanisms involving specific genes and molecules by helping researchers identify candidate genes and molecules for further investigation. As a consequence, many samples in population biobanks are actually from healthy donors rather than hospital patients (5). Beyond providing samples, some of these large biobanks are also direct providers of omics data. While biobanks are not necessary for generating omics data from one or a few individuals, they enable the collection of data from enough samples to represent the diversity of the population and capture variants as rare as those in 0.1% of the population (6). Because of rigorous sample processing and quality control procedures standardised across biobanks, the omics data generated from samples collected by different biobanks can also be more easily combined by researchers to yield insights (1). Furthermore, as new higher-resolution biotechnology develops, they can be used to investigate samples collected in the past (1). For example, the UK biobank enrolled 500,000 participants for its first cohort in 2006, collecting blood, urine, and saliva samples, in addition to substantial lifestyle data and physical measurements for each participant (5). Though there is no flashy silver-bullet discovery like penicillin directly resulting from the biobank, it has greatly increased our knowledge of which genes and proteins to target when designing new drugs, along with which genetic variants increase our predisposition to a range of diseases, such as cancer and cardiovascular diseases (8). Population biobanks are huge, long-term investments. For example, funding from the UK government and various non-profits for the UK biobank have exceeded £90 million British Pounds from its inception to 2014 (1). Reasons for their construction include understanding the mechanisms of disease, translating research into interventions, improving health outcomes, and promoting biotechnology (1). Population biobanks that are able to effectively engage sample donors can generate population data to support research into diseases that most heavily affect a country (1). The majority of the world’s biobank datasets are still composed primarily of individuals with white Northern European ancestry (9), and using data from one population can be significantly less effective for identifying risk factors in another population. This limitation serves as a driver for developing countries to build their own population biobanks (9). Part of the reason most biobanks are built is to serve as a national public good, with data made accessible to both academic researchers at affordable rates and to industry researchers (1, 10). Large population biobanks are usually run as a public entity or as public-private partnerships with a large proportion of public funding (10). In fact, even with cost recovery measures that charge users for accessing biobank samples — often with higher rates for industry researchers — revenues still fall below operating costs (1). That said, biobanks create benefits beyond their own countries, and multinational collaborations have expanded their scale and reach (1), allowing researchers to access omics data and request samples from biobanks overseas. With biobanking infrastructures in place, multinational collaborations have emerged that facilitate data sharing between research institutions across different countries through consortia – formal collaborations between participating institutions that establish common research goals and reduce competition over the use of specialised facilities (11). In other words, they seek to minimise situations in which multiple research groups inadvertently work on the exact same project, leading to an inefficient allocation of resources. One example is the International Cancer Genome Consortium (ICGC). This agreement creates a collaboration framework for data exchange in around 200 large-scale cancer research projects, with participating biobanks from Europe, China, Australia, USA, and other countries. Participating biobanks include large population biobanks, but also other types such as disease-specific biobanks (12). To finalise, biobanks are not simply a place where biological samples are stored. They are dynamic entities that can be scaled up and down, places where samples are sent in and out, and they face financial pressures as national research priorities change. They are places where innovation occurs in a wide range of areas, from cryostorage to management of digital information. The power of population biobanks and their research potential lies in their cohort sizes. Hopefully, biobanks will continue to generate valuable new discoveries as newly established cohorts around the world begin to mature. References Chalmers D, Nicol D, Kaye J. et al. Has the biobank bubble burst? Withstanding the challenges for sustainable biobanking in the digital era. BMC Med Ethics. 2016;17(1):39. doi:10.1186/s12910-016-0124-2. PMID: 27405974; PMCID: PMC4941036. Yamada, K.A., Patel, A.Y., Ewald, G.A. et al . How to Build an Integrated Biobank: The Washington University Translational Cardiovascular Biobank & Repository Experience. Clinical And Translational Science . 2013;6(3):226-231. doi: https://doi.org/10.1111/cts.12032 Seed deposit at Doomsday Vault ensures Australia’s plant future. ABC News. 2018 Mar 1. https://www.abc.net.au/news/2018-03-01/australia-makes-deposit-in-to-doomsday-vault-to-ensure-survival/9496308 De Souza, Yvonne G.; Greenspan, John S. Biobanking past, present and future: responsibilities and benefits. AIDS. 2013 ; 27(3):303-312. doi: 10.1097/QAD.0b013e32835c1244 Busby H, Martin P. Biobanks, national identity and imagined communities: The case of UK biobank. Science as Culture. 2006 Sep;15(3):237–51. doi:10.1080/09505430600890693 Murtagh, M.J., Demir, I., Harris, J.R. et al. Realizing the promise of population biobanks: a new model for translation. Hum Genet . 2011;130:333–345. doi: https://doi.org/10.1007/s00439-011-1036-3 Ferolito BR, Dashti H, Giambartolomei C, Peloso GM, Golden DJ, Gravel-Pucillo K, et al. Leveraging large-scale biobanks for therapeutic target discovery. Human Genetics and Genomics Advances. 2026 Jan;7(1):100556. doi:10.1016/j.xhgg.2025.100556 Szustakowski JD, Balasubramanian S, Kvikstad E, Khalid S, Bronson PG, Sasson A, et al. Advancing human genetics research and drug discovery through exome sequencing of the UK Biobank. Nat Genet. 2021 Jul;53(7):942–8. doi:10.1038/s41588-021-00885-0 Rudan I, Marušić A, Campbell H. Developing biobanks in developing countries. J Glob Health. 2011 Jun;1(1):2–4. PubMed PMID: 23198094; PubMed Central PMCID: PMC3484738. Caulfield T, Burningham S, Joly Y, Master Z, Shabani M, Borry P, et al. A review of the key issues associated with the commercialization of biobanks. Journal of Law and the Biosciences. 2014 Mar 1;1(1):94–110. doi:10.1093/jlb/lst004 Nature Index. 2021. How to be part of a research consortium. Available from: https://www.nature.com/nature-index/news/how-to-be-part-of-a-research-consortium Hudson (Chairperson) TJ, Anderson W, Aretz A, Barker AD, Bell C, Bernabé RR, et al. International network of cancer genome projects. Nature. 2010 Apr;464(7291):993–8. doi:10.1038/nature08987 Previous article back to Fact & Fiction Next article

  • Print Edition 2: Issue 4, 5 and 6 | OmniSci Magazine

    < Back to Print Editions Print Edition 2: Issue 4, 5 and 6 2023/2024 ABOUT THIS EDITION In various languages, the word ‘science’ can be traced back to its Latin origins of simply meaning ‘to know’. Today, explorers, curators, and researchers of scientific knowledge understand this as a systematic acquisition of information, with observations made and theories tested as we try to comprehend our world. For true advancement, science requires reciprocity: the mutual sharing between ‘scientists’ and individuals of society alike. In such a discourse we celebrate the beauty of scientific progress, whilst too holding space for the unease new unknowns can bring. Science communication is how we can continue to alleviate this dissonance, bridging knowledge gaps and seeking scientific understanding for all. The creation of Issue 4: Mirage, Issue 5: Wicked and Issue 6: Elemental over 2023 and 2024 has seen contributors create ever more informative content, aiming to make the innovations of science readily accessible to the public. Through experimenting with new formats, genres and mediums for illustrations, our contributors have formed a body of work that seeks to captivate and question. FEATURED ISSUES Issue 4: Mirage This issue explores the realms of science that are not what they seem. Is that shape in the distance reality or just a figment of your imagination? Issue 5: Wicked This issue spotlights the mischievous, malevolent and morally dubious. Issue 6: Elemental This issue explores the building blocks that comprise the world we live in. PURCHASE A COPY Keen to purchase a copy of the magazine? Click here to do so, at an OmniSci Magazine exclusive price! Alternatively, visit the Science Gallery Melbourne to find our magazines stocked in person. back to print editions

OmniSci Magazine acknowledges the Traditional Owners and Custodians of the lands on which we live, work, and learn. We pay our respects to their Elders past and present.

Subscribe to the Magazine

Follow Us on Socials

  • Facebook
  • Instagram
  • LinkedIn
UMSU Affiliated Club Logo
bottom of page